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Doctoral Candidates

ProgRET will give Doctoral Candidates (DCs) unparalleled training opportunities in outstanding academic and industrial settings through training-by-research via individual research projects, secondments, and network-wide training sessions. All individual training and research activities will provide each DC with the necessary skills in academic and industrial research.
The PhD candidates will obtain PhD diplomas from reputed universities within the ProgRET project.

WP1 – UNDERSTANDING MECHANISMS UNDERLYING adIRD IN RETINAL STEM-CELL DERIVED AND ANIMAL MODELS

DC1

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Sofia Manzo

Impact of ageing on 3D genome architecture in adIRD model in killifish, an aquatic animal model

Supervisor: Prof. JR Martinez-Morales
Host institute: The Andalusian Centre of Developmental Biology, Spain
Secondments: Evotec, Germany; Ghent University, Belgium
Doctoral program: Biotechnology at the Pablo de Olavide University

Characterization of stem cell models for defective spliceosome components in adIRD

Supervisor: Prof. D. Staněk
Host institute: Institute of Molecular Genetics, Czech Republic
Secondments: Evotec, Germany; Institute for Neurosciences of Montpellier, France
Doctoral program: Developmental and Cell Biology at Charles University Prague

DC2

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Carolina Silva

DC3

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Lihan Xu

High throughput screening assay for dominant BEST1 mutations to identify
therapeutic compounds in an iPSC-RPE platform

Supervisor: Dr. N. Schwarz
Host institute: Evotec, Germany
Secondments: Institute of Molecular Genetics, Czech Republic; Institute for Neurosciences of Montpellier, France
Doctoral program: Tübingen University

WP2 – ADVANCING DIAGNOSTICS IN adIRD USING A SINGLE-MOLECULE MULTI-OMICS FRAMEWORK

Definition of transcriptional units of adIRD genes in human retina, RPE, PPCs and
retinal organoids using long-read sequencing

Supervisor: Prof. S. Banfi
Host institute: Telethon Institute of Genetics and Medicine, Italy
Secondments: Phenopolis, UK (virtual); Ghent University, Belgium; Radboud University Medical Center Nijmegen, The Netherlands
Doctoral program: Human Genetics at University of Campania “Luigi Vanvitelli”

DC4

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Samuel Santamaria

DC5

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Nelson Martins

Mapping of 3D genome topologies in human retina, RPE, PPCs and ROs

Supervisor: Prof. E. De Baere
Host institute: Ghent University, Belgium
Secondments: Phenopolis, UK (virtual); The Andalusian Centre of Developmental Biology, Spain; The Institute of Molecular and Clinical Ophthalmology Basel, Switzerland
Doctoral program: Medicine and Health Sciences at Ghent University

Single-molecule multi-omics framework for adIRD diagnosis

Supervisor: Dr. S. Roosing
Host institute: Radboud University Medical Center Nijmegen, The Netherlands
Secondments: Phenopolis, UK (virtual); The Institute of Molecular and Clinical Ophthalmology Basel, Switzerland; Ghent University, Belgium
Doctoral program: Donders Institute for Brain, Cognition and Behavior at Radboud University Nijmegen

DC6

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Stefanida Shliaga

WP3 – THERAPEUTIC STRATEGIES FOR adIRD USING RNA THERAPY AND GENOME EDITING

DC7

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Hossein Dehghan Banadaki

Allele-specific invalidation of dominant-negative mutations in PRPH2

Supervisor: Prof. R. Collin
Host institute: Radboud University Medical Center Nijmegen, The Netherlands
Secondments: Ghent University, Belgium; Gulliver Biomed, Belgium
Doctoral program: Donders Institute for Brain, Cognition and Behavior at Radboud University Nijmegen

Allele-independent increase of protein translation for adIRD genes displaying haplo-insufficiency

Supervisor: Prof. F. Coppieters
Host institute: Ghent University, Belgium
Secondments: Evotec, Germany; Radboud University Medical Center Nijmegen, The Netherlands
Doctoral program: Medicine and Health Sciences at Ghent University

DC8

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Álvaro González Cid

DC9

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Maddalena Fuso

Allele-specific, mutation-independent rescue of dominant negative acting IRD
mutations by single gRNA-Cas variant genome editing

Supervisor: Dr. S. Kohl
Host institute: University of Tübingen, Germany
Secondments: Gulliver Biomed, Belgium; Institute for Neurosciences of Montpellier, France
Doctoral program: Mathematics-Natural Sciences at Eberhard Karls Universität Tübingen

Evaluating allele-specific invalidation therapies for autosomal dominant CRX
mutations

Supervisor: Dr. V. Kalatzis
Host institute: Institute for Neurosciences of Montpellier, France
Secondments: Evotec, Germany; University of Tübingen, Germany
Doctoral program: Mathematics-Natural Sciences at Eberhard Karls Universität Tübingen

DC10

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Kobe Outtier
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HORIZON-MSCA-2022-DN — ProgRET  — No.101120562
ProgRET 2024
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